Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGDVTSSI----------APCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMASSFRN-----LNMGNAASIPSKCGVSV-AFPISTSVDCSKIN--------------
3FKE Chain:A ((218-340))
DISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAAPPVIHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTLGLKI
General information:
TITO was launched using:
RESULT:
Template:
3FKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25695 for 595 contacts (-43.2/contact) +
2D Compatibility (PS) -9050 + (NN) 2171 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -36924.0 ( -62.06 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_3FKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKE-query.scw
PDB file :
Tito_Scwrl_3FKE.pdb
: