Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNALQLTPCAGAIIGSAAPTASCCSKMKE-----------QQPCMCQYARDPNLKQY--VDSPNGKKVMAACKVPVPSC
1T12 Chain:A ((9-78))
-----SNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13309 for 350 contacts (-38.0/contact) +
2D Compatibility (PS) -5403 + (NN) 1891 + (LL) 876
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -20595.0 ( -58.84 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: