Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------RASKKASCDLMQLSPCVSAFSGVGQGSPSSACCSKLKAQGSSCLCLYKDDPKVKRIVSSNRTKRVFTACKVPAPNC--------------------- |
| 4JEM Chain:A ((14-170)) | AVGSVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIEHFESRGTTVYNAHRREAWGAEFLSPAEATRLDHDEIKAADVFVAFPGVPASPGTHVEIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEILRFSGTEEIVERLDGAVARVLGRAGEPTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16975 for 456 contacts (-37.2/contact) +
2D Compatibility (PS) -8249 + (NN) -2078 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 450
Total energy: -31752.0 ( -69.63 by residue)
QMean score : 0.479
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