Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DEMMGRCMHEIANCLVAIDKGTKLPSYCCGRMVK-----------PQPCACKYF------IKNPVLLPRLLIACRVPHPKC
2ALG Chain:A ((8-79))
-------SSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30623 for 310 contacts (-98.8/contact) +
2D Compatibility (PS) -5127 + (NN) 1870 + (LL) 548
1D Compatibility (HY) -400 + (ID) 700
Total energy: -34432.0 ( -111.07 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: