Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPLGTCGAQLSQLAPCARYSVPPLPGQALPAPGPECCSALGSVSR----------DCACGA-----I-----DIINSLPAKCGLPRVSCQ
1T12 Chain:A ((2-76))
----ITCGQVTSNLAPCLAYLRNT---G----PLGRCCGGVKALVNSARTTEDRQIACTCLKSAAGAISGINLGKAAGLPSTCGVN-----
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21201 for 339 contacts (-62.5/contact) +
2D Compatibility (PS) -5684 + (NN) -4527 + (LL) 644
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -35718.0 ( -105.36 by residue)
QMean score : 0.330
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: