Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGAGECGRSSPD------RMALRMAPCISAADEPDSAPSSSCCSAVHTLGKSPSCLCAVMLSGTA------------KMAGIKPEVA-ITIPKRCNM--------ADRPVGYKCGDYTLP
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32285 for 545 contacts (-59.2/contact) +
2D Compatibility (PS) -9038 + (NN) -6492 + (LL) -40
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -51255.0 ( -94.05 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: