Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------AGECGRMPINQAAASLSPCLPATKNPRGKVPP-------VCCAKVGALIRTNPRCLCAVMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP
2P5T Chain:A ((67-158))
LNPVEDYELTLKIEIVKERGANLLSRLYRYQDSQGISIDDESNPWILMSDDLSDLIHTN------IYLVETFDEIERYSGYLDGIERMLEISEKRMVA--------
General information:
TITO was launched using:
RESULT:
Template:
2P5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17165 for 461 contacts (-37.2/contact) +
2D Compatibility (PS) -7712 + (NN) 1566 + (LL) 824
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -26687.0 ( -57.89 by residue)
QMean score : 0.259
(partial model without unconserved sides chains):
PDB file :
Tito_2P5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5T-query.scw
PDB file :
Tito_Scwrl_2P5T.pdb
: