Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDCTVDLKGLIRECKQYVMFPASPKITPSSACCSVVQKVNSPCLCSKVTKEIEKVVCMDKVVYVADYYKNPLKPGSDCGSYHVPSQRR------------
2GRG Chain:A ((1-98))
MKSSIPITEVLPRAVGSLTFDENYNLLDTSGVAKVIEKSPIAEIIRKSNAELGRLGY--SVYEDAQYIGHAFKKAGHFIVYFTPKNKNREGVVPPVGITN
General information:
TITO was launched using:
RESULT:
Template:
2GRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41517 for 638 contacts (-65.1/contact) +
2D Compatibility (PS) -8611 + (NN) 278 + (LL) 132
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -54318.0 ( -85.14 by residue)
QMean score : 0.262
(partial model without unconserved sides chains):
PDB file :
Tito_2GRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GRG-query.scw
PDB file :
Tito_Scwrl_2GRG.pdb
: