Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------ATSSSSSSQLHCGTVTSLLSGCAAFVRGHGGGAQ-----------LPSPGTPCCDGVAGLYAVAADSADNWRAVCRCMARLVRRHSSNASAIALLPGV--CGVVSPWTFAAGNTNSNRPYCRSLP |
| 1GZS Chain:B ((1-165)) | GSLTNKVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKNDVFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQNTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GZS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14252 for 689 contacts (-20.7/contact) +
2D Compatibility (PS) -11283 + (NN) 459 + (LL) 0
1D Compatibility (HY) 0 + (ID) 850
Total energy: -25926.0 ( -37.63 by residue)
QMean score : -0.005
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