Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------------AISCGTV--TSNLAPCAVYLMKGG----------------------PVPAPCCAGVSKLNSMAKTTPDRQQACKCLKTAAKNVNP-------------SLASSLPGKCGVSIPYPISMSTNCDTVK
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQV--------RDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN-------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27008 for 559 contacts (-48.3/contact) +
2D Compatibility (PS) -7356 + (NN) -3156 + (LL) 532
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -39338.0 ( -70.37 by residue)
QMean score : 0.239
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: