Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------LSCSQVTSGLAPCLPYLQGRGPLGGCCSGV-KDLLAAAKTPADRKTACTCMKSTANSIKGIDAGKA--ASIPATCGVNIPYKISPSTDCTKVE-------------------------------------------------------------------------------------------------------------------- |
| 3S40 Chain:A ((3-300)) | KTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGTVFECTNGLAP----LEIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLI--TKEHVKPVDVAKANGQHFLNFWGIGKIGYYLSTIETFPVKITYDGQVYEDEAVLVMVGNGEYLGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETEEEKEVDTDSSLHTPCQIELLQGHFTMIYNPAVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14049 for 432 contacts (-32.5/contact) +
2D Compatibility (PS) -8443 + (NN) -911 + (LL) 220
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -27333.0 ( -63.27 by residue)
QMean score : 0.415
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