Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------EPAPAPAPGEEACGKVVQDIMPCLH-----FVKGEEKEPSKECCSGTKKL---------SEEVKTTEQKREACKCI-----VRATKG-ISGIKNELVAEVPKKCDIKTTL------PPITADFDCSKIQST- |
| 3P8B Chain:B ((2-148)) | AGKIFAVRVTHGQEETTAKLIYSKVRTYNLPIYAILAPSRVKGYIFVEAPNKGVVDEAIRGIRHARGVLPGEVPFKEIEHFLEEKPAVSGLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVVQFIDAIVPIPVTIKGDYVRLISKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -958 for 619 contacts (-1.5/contact) +
2D Compatibility (PS) -10633 + (NN) 5932 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -10209.0 ( -16.49 by residue)
QMean score : 0.270
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