Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------AIECSDVL-------SRPVHCLSYFVTPRATLTPT--SACCRESEEVLGMANSMGAKEDLCN---------------CFVGLIRGFRPNPNKIEGLLSSCALQLFFPIDPVTALPDCTQIQ-------------
4A1R Chain:A ((5-146))
SVPSRYSLVFDADRQVNAAAGAQPAPIKIRVLLLRSDAEFMDADFFSLQNDAKSVLGNSLLDSDQFFLTPGQTGKKLGGQSALDARYIGVIAEYQNLDGKTWRISLPLPEPTETNFYKVWQFSPDELEAHIVAGVSGLRPVK
General information:
TITO was launched using:
RESULT:
Template:
4A1R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32637 for 558 contacts (-58.5/contact) +
2D Compatibility (PS) -10138 + (NN) -3021 + (LL) 0
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -48696.0 ( -87.27 by residue)
QMean score : 0.522
(partial model without unconserved sides chains):
PDB file :
Tito_4A1R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A1R-query.scw
PDB file :
Tito_Scwrl_4A1R.pdb
: