Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------AVPCSTVDMKAAACVGFATGKDSKPSSACCTGLQQLAQTVKSVDDKKAICRCLKASSKSLGI---KDQFLSKIPAACNIKVGFPVSTATNCETIH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4IUW Chain:A ((4-633)) | LPRIQDDLYLAVNGEWQAKTPIPPDKSVVSADSNLTDDIRQKLVADLSTMTKTAKTLPLQYAARLFAKANDQTRRQQLGIEPVRDRISFLMALTTLDQFRSAMPKLVADQYVLPISPYVDADMHDAEHNILNLGGPDTILPDAAMYNQEDAENAADLAAWSQMAAAMLAAVGFSQTDQTAYVEAAKRFDRRLADYVPANVDLAVDSTYDNPLSWQAFEDAAGYLGIPQAFATYMPQTPAKVNAVVPAYLPHLSKLLTPDNYSEWHAWMVINELLTCATYLSDDLRQLAGQYDRFLAGQPEASSWTKHAFGIANEYFDDVIGQYYGQTYFGADAKADVTAMVKQILAQYRVQLENNTWLSPATKQKAMRKLATMQVKMGYPARLFSLYDHLSVDVDDDLLTAILKLSAQTQAFWFKQLGQTVDRNQWNMPGHLVNASYDPLKNDITFPAGILQPPYYSLKWTRAENLGGTGATIGHEISHSFDNNGALYDEYGNLHNWWTPADKQAFDQLVKAMAAQFDGRDYEGVKVNGTLTVSENMADNAGMDVALALLGDQPDVKDLQAFFITYARSWATKMRPERAKTVLRQDVHAPATLRVNVPVQNFPAWYQAFNVQPQDGMYRQPQKRLTIWHQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4443 for 407 contacts (-10.9/contact) +
2D Compatibility (PS) -9352 + (NN) -1111 + (LL) 0
1D Compatibility (HY) 400 + (ID) 650
Total energy: -15156.0 ( -37.24 by residue)
QMean score : 0.505
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