Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-LSCGQVTS----GLAPCLPYLQGRGPIGGC----CGGIKGLLGAAKTPADRKTACTCLKSAASAIKGINVGKAAGIPRLCGVNIP-YKISPSTDCSKVR----
2A10 Chain:A ((4-107))
QSAVGSIETIGFPGILAAADAMVKAGRITIVGYIRAGSARFTLNIRGDVQEVKTAMAAGIDAINRTEGADVKTWVIIPRPHENVVAVLPIDFSPEVEPFREAAE
General information:
TITO was launched using:
RESULT:
Template:
2A10.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41142 for 660 contacts (-62.3/contact) +
2D Compatibility (PS) -9172 + (NN) -64 + (LL) 0
1D Compatibility (HY) -400 + (ID) 900
Total energy: -51678.0 ( -78.30 by residue)
QMean score : 0.355
(partial model without unconserved sides chains):
PDB file :
Tito_2A10.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A10-query.scw
PDB file :
Tito_Scwrl_2A10.pdb
: