Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ITCGQVASSLAPCISYL-----QKGGVPSASCCSGVKALNSAASTTADRKTACNCLKNLAGPKSGINEGNAASLPGKCKVNVPYKISTFTNCANIK----------
1R5E Chain:A ((29-133))
DNVTSSQLLSVRHQLAESAGLPRDQHEFVSSQAPQSLRNRYNNLYSHTQRTLDMADMQHRYMTGASGINPGM---LPHENVDDMRSAITDWSDMREALQHAMGIHADI
General information:
TITO was launched using:
RESULT:
Template:
1R5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8820 for 573 contacts (-15.4/contact) +
2D Compatibility (PS) -8579 + (NN) 1869 + (LL) 260
1D Compatibility (HY) 400 + (ID) 900
Total energy: -15770.0 ( -27.52 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1R5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R5E-query.scw
PDB file :
Tito_Scwrl_1R5E.pdb
: