Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQ----VASAIAPCISYARGQGSGP------SAGCCSGVKSLNNAARTTADRRAACNCLKNAAAGVSG-----------LNAGNAASIPSKCGVSIPYTIS--TSTDCSRVN-----
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDS--MYKEH----GAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12466 for 581 contacts (-21.5/contact) +
2D Compatibility (PS) -8428 + (NN) -1598 + (LL) 232
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -26210.0 ( -45.11 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: