Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APCNPVELSPCLAAISGSQPPSAECCSKLKE-----------QVPCFCDYVKNPVFKPY--VDSPNAKKVAATCGVAFPTC
1T12 Chain:A ((9-78))
-----SNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20059 for 350 contacts (-57.3/contact) +
2D Compatibility (PS) -5580 + (NN) -1330 + (LL) -44
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -33563.0 ( -95.89 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: