Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ANPCNPAQLTP-CAGPALF-GGAVPPACCAQLRAQQGCLCGYARSPNYGSYIRSPNAARLFAICNLPMPRCR----------------------------
2EP8 Chain:A ((315-414))
GSSGSSGKHKKLFEGLKFFLNREVPREALAFIIRSFGGEVSWDKSLCIGATYDVTDSRITHQIVDRPGQQTSVIGRCYVQPQWVFDSVNARLLLPVAEYF
General information:
TITO was launched using:
RESULT:
Template:
2EP8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27247 for 395 contacts (-69.0/contact) +
2D Compatibility (PS) -7586 + (NN) -6115 + (LL) 0
1D Compatibility (HY) -400 + (ID) 500
Total energy: -41848.0 ( -105.94 by residue)
QMean score : 0.360
(partial model without unconserved sides chains):
PDB file :
Tito_2EP8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EP8-query.scw
PDB file :
Tito_Scwrl_2EP8.pdb
: