Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------AISCGTVVSK---LAPCLGFLR-------------GGGSPPPACCSGIRNLQSMARSTPDRQAACGCLKSASAGVNMRNAAALPGKCGVNIGYPISRSVDCSRVK
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNL-------MSQPCQM--
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23485 for 547 contacts (-42.9/contact) +
2D Compatibility (PS) -7679 + (NN) 3039 + (LL) 336
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -31739.0 ( -58.02 by residue)
QMean score : 0.170
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: