Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------AIPCGQVNSALASCVSYAKGSGASPPGACCSGVRRLAGLARSTADKQAACRCIKSA--AGGLNPGKAASIPSKCGVSIPYSISASVDCSKIH---------------------------------------- |
| 4B9G Chain:A ((16-161)) | DIDSAVRIIPVNYDSDPKLNSQLYTVEMTIPAGV------------SAVKIVPTDSLTSSGQQIGKLVNVNNPDQNMNYYIRKDSGAGKFMAGQKGSFSVKENT--SYTFSAIYTGGEYPNSGYSSGTYAGHLTVSFYSNDNKQRTEIATKNFPVSTTIS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4B9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 2870 for 446 contacts (6.4/contact) +
2D Compatibility (PS) -8256 + (NN) -4069 + (LL) 1152
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -11103.0 ( -24.89 by residue)
QMean score : 0.255
|
|
|