Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCNPV--GLSPCAGAMSGSGPPSKLCCSKLRE-----------QKPCLCGYYRDPNLRQY--VDSPNAKKVATACDVHVTC
1T12 Chain:A ((3-77))
-TCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNI--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18176 for 379 contacts (-48.0/contact) +
2D Compatibility (PS) -5752 + (NN) 2457 + (LL) 208
1D Compatibility (HY) -6000 + (ID) 800
Total energy: -28063.0 ( -74.04 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: