Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAEVSCGDAVSALIPCGSFLVGAVA----GAPSESCCRGAQGLRRMAGTPGARRALCRCLEQ-SGPSFGVLPDRARQLPALCKLGISIPVSPHTD-CDKIQ
2OY9 Chain:A ((6-89))
TLPISLDWSTEEVIDVVHFFQAIEQAYDQGIAREDLLGKYRRFKEIVPSKSEEKQLFRAYEQENDVSCYQTIKKARE-----------------EMEEHIQ
General information:
TITO was launched using:
RESULT:
Template:
2OY9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30329 for 471 contacts (-64.4/contact) +
2D Compatibility (PS) -8083 + (NN) -546 + (LL) 840
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -42418.0 ( -90.06 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_2OY9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OY9-query.scw
PDB file :
Tito_Scwrl_2OY9.pdb
: