Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATAQCRSLTEYSPCLDAVTTG--AEPTDQCCETLAGVMSMDDGLACLCDALTSDAASSLGIRTSDAVQLPSKCQAKTGLTYTHGYNCKGATVP
2RKN Chain:A ((7-72))
-----MSQDELNECKPAVSKENPTSPSQPCCTALQHA-----DFACLCGYKNSPWLGSFGVDPELASALPKQCGLA-----------------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27512 for 401 contacts (-68.6/contact) +
2D Compatibility (PS) -6548 + (NN) 416 + (LL) 1084
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -37160.0 ( -92.67 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: