Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLQQVAGCLDAVTKGATPTGSCCTQLGQVD----------APCFCNLLAN-GKYSDAYVNNALHVPARCGSNSAAYAKFKGRNCAGYVVP
2ALG Chain:A ((8-77))
---SSSLAPCIPYVRGGGAVPPACCNGIRNVNNLARTTPDRQAACNC-LKQLSASVPGVNPNNAAALPGKCGVS------------------
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24597 for 356 contacts (-69.1/contact) +
2D Compatibility (PS) -5860 + (NN) -1112 + (LL) 1060
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -34559.0 ( -97.08 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: