Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------ATCSPTQLSPCAPAIIGNAAPT-------AACCGRVKAHPASCLCKYKKDPNLKRYVNSPNGKKLFAACKVRLPSC---------
2VLG Chain:A ((9-108))
TDIHAVLASNGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFYNEHHLMPCTFRFIKKDHTIVWVEAAVEIVEREIILKMKVL
General information:
TITO was launched using:
RESULT:
Template:
2VLG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15496 for 359 contacts (-43.2/contact) +
2D Compatibility (PS) -7264 + (NN) -4323 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -28483.0 ( -79.34 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_2VLG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VLG-query.scw
PDB file :
Tito_Scwrl_2VLG.pdb
: