Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EGCDNDRQDMIRECAKYQKFPKEPKKDPSKACCAVWQKADFPCLCKDVTKELEKVAYVAKFCKWPFPSGYKCGSYTFPLGQ
1MIU Chain:B ((7-63))
----PVDLGLLEEDDEFEEFPAEHVWEDN------WDDDDFS---NQLRAELEKH--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1MIU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10011 for 121 contacts (82.7/contact) +
2D Compatibility (PS) -4234 + (NN) -5183 + (LL) 1824
1D Compatibility (HY) -2400 + (ID) 550
Total energy: -532.0 ( -4.40 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1MIU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MIU-query.scw
PDB file :
Tito_Scwrl_1MIU.pdb
: