Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---ADCKEERRVAINACKPI---LYGKDPTP-------------------ACCERIRVTHIECVCPVITPKLAALVDVNRMVRLIEGCGRNVPRHYKCGSITTP
1IGN Chain:A ((94-242))
KRKFSADEDYTLAIAVKKQFYRDLFQIDPDTGRSLIRTQSRRGPIAREFFKHFAEEHAAHTENAWRDRFRKFLLAYGIDDYISYYEAEEPMKNLTPTPGNYNS-
General information:
TITO was launched using:
RESULT:
Template:
1IGN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14835 for 432 contacts (-34.3/contact) +
2D Compatibility (PS) -8121 + (NN) -4653 + (LL) -140
1D Compatibility (HY) 0 + (ID) 600
Total energy: -28349.0 ( -65.62 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1IGN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IGN-query.scw
PDB file :
Tito_Scwrl_1IGN.pdb
: