Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------QCQGSIQD---LKICVPYVQKKGPKIPPS----------QACCDAIKGVDILCVCHHLPPDIGELISIEKVVFVLQVCREPLAPGTKCGSKNIKALLS
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIE---CNLMSQPCQM-
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41935 for 543 contacts (-77.2/contact) +
2D Compatibility (PS) -7917 + (NN) 813 + (LL) -84
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -53523.0 ( -98.57 by residue)
QMean score : 0.152
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: