Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AIACSDVIKDLRPCVNYLVN--GSGMPPAACCTGASNLASSASTS---------ADKKAACECIK----------TAAKKLN-PNPQLAKGLPGNCKISL-PFTVSANVDCSKIG--------
2Z15 Chain:A ((8-126))
----SGMQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPEKPYKGSGFRCIHIGEKVDPVIEQASKESGLDIDDVRGNLPQDLSVWIDPFEVSYQIGEKGPVKVLYVDDN
General information:
TITO was launched using:
RESULT:
Template:
2Z15.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27300 for 534 contacts (-51.1/contact) +
2D Compatibility (PS) -9316 + (NN) -2258 + (LL) 548
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -44676.0 ( -83.66 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_2Z15.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z15-query.scw
PDB file :
Tito_Scwrl_2Z15.pdb
: