Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSP--LELSSCFAAITSSAPPSSMCCSKLRE-----------QRPCLCGYIRDPNLSQY--VNSANARRVASTCGVPFPNC
1T12 Chain:A ((3-78))
-TCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25625 for 376 contacts (-68.2/contact) +
2D Compatibility (PS) -6185 + (NN) -546 + (LL) 124
1D Compatibility (HY) -5600 + (ID) 950
Total energy: -38782.0 ( -103.14 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: