Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--DYTRLMIQVHSYVPFCAYTYDY--FSYCLDFL---------------------TGYYYKPGKKCCVHIVKLNIIAKHKKENPRLLCNCVEMMTRGYTP---------PMLADKIQQLPLLCNTHLSFPISSSMDCSTV
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVR---------DECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74681 for 635 contacts (-117.6/contact) +
2D Compatibility (PS) -9337 + (NN) -1335 + (LL) 1216
1D Compatibility (HY) 2000 + (ID) 500
Total energy: -82637.0 ( -130.14 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: