Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRDVFREATPMTCRSPLPDLRDMMEKLTVFEPTIDSTVETQSTSSEEMIPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQYCRLRKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSGELEELVNKVSKAHRETFPSLCQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFTSLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPHRVDQLQEPLLEALKIYARRRRPNKPHMFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEIFEDSSDSNDSGAAAVVPAPNIKRMGQRQAAWVKGERPEWVRGRRRGSKSRYKAGFKAGKARSRDSPDNNGEIRQGDERSEMSVRAEQDFALE
4DM8 Chain:A ((22-261))---------------------------------------------------------------------------------------------------------------------------------------------------------ESYEMTAELDDLTEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRP--PHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLE------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4DM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139467 for 1859 contacts (-75.0/contact) +
2D Compatibility (PS) -25561 + (NN) -18104 + (LL) 12356
1D Compatibility (HY) -33600 + (ID) 10350
Total energy: -214726.0 ( -115.51 by residue)
QMean score : 0.759

(partial model without unconserved sides chains):
PDB file : Tito_4DM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DM8-query.scw
PDB file : Tito_Scwrl_4DM8.pdb: