Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEESELARIKSSKAVVSKTIKEGKQGRKIPIWLMRQAGRSLPEYR--RAVKDTSSFMEICYNTDLVVELTLQPVARFSMDAAIIFSDILIVADVLGCDVDFIRGVGPT----IKPVKNFKELRNPQKIETKTLPILNAIRKVRDKLPEEKSLIGFAGGPWTVASYIIEGRSSKTFSKV---LNLHPSSLEQIIEQITEVTISYLVKQIEFGADVIQLFDSNAGVLSGELFEECVIKPTKKIVSAIKGKFPD-----FPIIGFPKSAGSLYKDYCEKTGVSAVSIDYNVPIEWAKENL--KIPLQGNLNPSLLAYNKMEAIKETKRIIDCFRDLPFIFNLGHGVLPNTPIENIAALVDLVKSQ |
| 3GW3 Chain:A ((25-360)) | -----------------------GEETDYTPVWCMRQAGRYLPEFRETRAAQD---FFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKD-GHFALEELAQAGYEVVGLDWTVAPKKARECVGNTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -217638 for 2752 contacts (-79.1/contact) +
2D Compatibility (PS) -33788 + (NN) -7135 + (LL) 2380
1D Compatibility (HY) -24400 + (ID) 5900
Total energy: -286481.0 ( -104.10 by residue)
QMean score : 0.564
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