Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFLNTHPKKKEIVAEFNNE--HYINESDLKTLEEGKDLVDKINNINLIQQNEESEELNIGKVLA
3B2D Chain:A ((141-188))
IKFPKDFPARNLKVLDFQNNAIHYISREDMRSLEQAINLSLNFNGNNVKGIELGAFDSTIFQSLN
General information:
TITO was launched using:
RESULT:
Template:
3B2D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2429 for 224 contacts (-10.8/contact) +
2D Compatibility (PS) -4607 + (NN) 596 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -9940.0 ( -44.38 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_3B2D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B2D-query.scw
PDB file :
Tito_Scwrl_3B2D.pdb
: