Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSITSEKKKNLINTYAIKEDDTGSSFVQCAILTERISNLTEHFKVHKHDHHSKRGLLILIGRRRKHLNYIKRKFGDEAYQQLIEKLGIRK
4IYL Chain:A ((3-87))
--LDSAKKAEIVAKFAKKPGDTGSTEVQVALLTARIAELTEHLKIYKKDFSSRLGLLKLVGQRKRLLSYLKRK-DYNSYSKLITELNL--
General information:
TITO was launched using:
RESULT:
Template:
4IYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7347 for 413 contacts (-17.8/contact) +
2D Compatibility (PS) -9120 + (NN) -5193 + (LL) 476
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -31534.0 ( -76.35 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_4IYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IYL-query.scw
PDB file :
Tito_Scwrl_4IYL.pdb
: