Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MWFYKLPSTNILDTQLTDVTTAPVVKLNILIITSNSTVVPVDVELGNLLCLQVMQARNISDGIMWGYTGAVILHVI
1W6S Chain:A ((479-523))
--------------------TMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAIY
General information:
TITO was launched using:
RESULT:
Template:
1W6S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18633 for 234 contacts (-79.6/contact) +
2D Compatibility (PS) -4858 + (NN) 733 + (LL) 1504
1D Compatibility (HY) 0 + (ID) 350
Total energy: -21604.0 ( -92.32 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_1W6S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W6S-query.scw
PDB file :
Tito_Scwrl_1W6S.pdb
: