Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNYYEILEYVAP----EEINKAYKRLGLKCHPDKLLPKKRKISRIVKKAINGAALSKLELEEMQSL
2LO1 Chain:A ((7-49))
---TYYDVLG-VKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGE
General information:
TITO was launched using:
RESULT:
Template:
2LO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4831 for 198 contacts (-24.4/contact) +
2D Compatibility (PS) -4011 + (NN) -3109 + (LL) 544
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -16357.0 ( -82.61 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_2LO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LO1-query.scw
PDB file :
Tito_Scwrl_2LO1.pdb
: