Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSG---IMQGKYEFLNEE---NTKVFEVTIPSFSL--DSPYTNIRPH
4UNX Chain:A ((230-291))
-----------------------------------------------------------------------------IVKPGDILMINSNGNLVAPRGYFKLRTGKSSVMRSDALIDTCVSECITPNGSIPNDKPFQNVNKI
General information:
TITO was launched using:
RESULT:
Template:
4UNX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7014 for 162 contacts (-43.3/contact) +
2D Compatibility (PS) -5866 + (NN) -2343 + (LL) 6168
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -13155.0 ( -81.20 by residue)
QMean score : 0.241
(partial model without unconserved sides chains):
PDB file :
Tito_4UNX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UNX-query.scw
PDB file :
Tito_Scwrl_4UNX.pdb
: