Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKYDETKVKPAISTSQEPKRINGSKFQSVLSKRRYDINFDDKKYAVKTVKTRFLETEQQSSKLRDLLESI--PVIGRFLAKIFTSEKETYKKLQLQIDRSSKIRNESRIDDKYTEEISSKLKKSNIEQVDDKKSRSP |
3DKA Chain:A ((61-136)) | --------------------KEGNASPFQN----TETDLNVLAKTYTEKTVAILEQLTEEQLDREID---AFGRKVTGRALLQL-AMEHEIHHKGNLFVYVREMGHTELPFYQQRM----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 22976 for 317 contacts (72.5/contact) +
2D Compatibility (PS) -6854 + (NN) -892 + (LL) 3480
1D Compatibility (HY) 0 + (ID) 1200
Total energy: 17510.0 ( 55.24 by residue)
QMean score : 0.449
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