Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVIVLKLPEVTVNWSYPVLNFDLSFRIILISFLSVAFLIVLPAKNFSFSEMLSFFAYTISSLCAILSKQIISVIIFCELMAISASFIIAAGCKDNGPAIRYACVHFFVGIILTAGLAIQNPNLIIMGLLIICACFPFSFWVVDAYPAASLHGASYLSLFTTKISFLIALLHTYNLWQDHAEILAFLGTITAIYGIIFTSLEQNIRRFLAYNVVGQMGILIMTGSLLSHSKNAIPLLILNIIFSIVYQLLLTAVANSIILRTKAVNFNRVGKFMSAEGIYALIAILTMAAFPGTAGFISKSYIAVEIKMNGTNLELYKNLHKILNLSLYLSVGLKFLYYIFITKSRSKLLAEKGGGVAMIILASICVIAGNPYLPIYNKPSIFNLAYNTKNIWSQLNLLLCVTLLFIPLRKLFLPRINLKMDIDWIFRALIPYVVSLFNKLIFKMRKISAGALQNLTNSLTNLYFNNANKLKEALSYDSVSFISASSLFLMSILLVLLCLNH |
3OBQ Chain:A ((68-93)) | -----------------------------------------------------------------------------------------------------------------------------------TYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHPQSDLLGLIQVMIVVFGDEPPVFSRP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9424 for 97 contacts (-97.2/contact) +
2D Compatibility (PS) -2805 + (NN) 727 + (LL) 39268
1D Compatibility (HY) -800 + (ID) 250
Total energy: 26716.0 ( 275.42 by residue)
QMean score : -0.131
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