Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKGKELSSDVYEANIVLNDKTMATLPKIGYHMLNDQLVMHNHVTEEKVVISRDFH----FLKAVKFSDDYKLTFYNALGNEFFEYKKYDLQYSNISDKNKFIGLNCAKKIQFESRRVI
3LO0 Chain:A ((115-188))
-------------------------------------LVMHD---EDVKILAVPTHKVDQYYNNIKDYSDFPVSFLNSISHFFTFY----------------VSVEGWKDVTVAEKLIL
General information:
TITO was launched using:
RESULT:
Template:
3LO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11971 for 313 contacts (-38.2/contact) +
2D Compatibility (PS) -5972 + (NN) 3638 + (LL) 3428
1D Compatibility (HY) -6400 + (ID) 650
Total energy: -17927.0 ( -57.27 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_3LO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LO0-query.scw
PDB file :
Tito_Scwrl_3LO0.pdb
: