Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSIKVQRKKMELG----AEVADQFLSEMNQTKIKIQDAKEATETARNVSKSFAQNAKDKNTELHDKVVNFTKKAETASENAEDFAREAFLSKQSTKTLKQETKEL
3ZGX Chain:C ((22-64))
----INRLEIDIYDIPVAKITEQYLLYVHTMR--VLELDIASEYLVMAATLLSIKSRMLLP--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZGX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7335 for 164 contacts (44.7/contact) +
2D Compatibility (PS) -4342 + (NN) -1320 + (LL) 3864
1D Compatibility (HY) -2800 + (ID) 300
Total energy: 2437.0 ( 14.86 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3ZGX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZGX-query.scw
PDB file :
Tito_Scwrl_3ZGX.pdb
: