Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGER----INKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDWQGDKPEI-------LVDRVVGNVHNGAIILFHDHDNKSNTVEALPQ-IIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
2IW0 Chain:A ((43-236)) | --------------------------------------------------------LVALTYDDGPFT-FTPQLLDILKQNDVRATFFVNGNNWANIEAGSNPDTIRRMRADGHLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRIDGFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDTNLDTKDYENNKPETTHLSAEKFNNELSADVGANSYIVL-SHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECLGDAPENWYKAHHHHHH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70939 for 1442 contacts (-49.2/contact) +
2D Compatibility (PS) -19020 + (NN) -6581 + (LL) 3588
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -103552.0 ( -71.81 by residue)
QMean score : 0.435
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