Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRERKVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYFNDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
1WJX Chain:A ((3-122))
---VLENRRARHDYEILETYEAGIALKGTEVKSLRAGKVDFTGSFARFEDGELYLENLYIAP--------VDPRRKRKLLLHKHELRRLLGKVEQKGLTLVPLKIYFNERGYAKVLLGLARGK--------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WJX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57914 for 785 contacts (-73.8/contact) +
2D Compatibility (PS) -12339 + (NN) -1556 + (LL) 2952
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -82207.0 ( -104.72 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_1WJX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WJX-query.scw
PDB file :
Tito_Scwrl_1WJX.pdb
: