Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSV-AYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR
3CX5 Chain:D ((203-230))
---DERKRLGLKT------VIILSSLYLLSIWVKKFKWAGIKTRKFVFNPPKPRK--------------
General information:
TITO was launched using:
RESULT:
Template:
3CX5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11439 for 95 contacts (-120.4/contact) +
2D Compatibility (PS) -2742 + (NN) -734 + (LL) 1108
1D Compatibility (HY) -1600 + (ID) 300
Total energy: -15707.0 ( -165.34 by residue)
QMean score : 0.161
(partial model without unconserved sides chains):
PDB file :
Tito_3CX5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CX5-query.scw
PDB file :
Tito_Scwrl_3CX5.pdb
: