Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNKVVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
2CQA Chain:A ((6-28))
-----------------------SGKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIES
General information:
TITO was launched using:
RESULT:
Template:
2CQA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2 for 52 contacts (-0.0/contact) +
2D Compatibility (PS) -2351 + (NN) -310 + (LL) 1120
1D Compatibility (HY) -800 + (ID) 400
Total energy: -2743.0 ( -52.75 by residue)
QMean score : -0.116
(partial model without unconserved sides chains):
PDB file :
Tito_2CQA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CQA-query.scw
PDB file :
Tito_Scwrl_2CQA.pdb
: