Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSKKSEGRIYFAIEVDIFRYIATYYMLCEQKGSQTEEGVVHNDKYKEQRKKLYGKDEEQKGNRK
2D7E Chain:A ((78-89))
---------------WRLLLWAADYYHHPIGDVLFHALPILLR----------------------
General information:
TITO was launched using:
RESULT:
Template:
2D7E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3479 for 40 contacts (-87.0/contact) +
2D Compatibility (PS) -1150 + (NN) 642 + (LL) 2480
1D Compatibility (HY) -1600 + (ID) 150
Total energy: -3257.0 ( -81.42 by residue)
QMean score : -0.331
(partial model without unconserved sides chains):
PDB file :
Tito_2D7E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2D7E-query.scw
PDB file :
Tito_Scwrl_2D7E.pdb
: