Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAYNTAPKDLRLIVFLGHLTINNFIILYSIVSIIRNFMSIDKKLKILPNKVLIIVTLVPKDTEKMLQDDKNSKFIMLIY
2R2Q Chain:A ((22-39))
---------------------------------------------KKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTV
General information:
TITO was launched using:
RESULT:
Template:
2R2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -988 for 44 contacts (-22.5/contact) +
2D Compatibility (PS) -2125 + (NN) -1398 + (LL) 3856
1D Compatibility (HY) -400 + (ID) 350
Total energy: -1405.0 ( -31.93 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_2R2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R2Q-query.scw
PDB file :
Tito_Scwrl_2R2Q.pdb
: