Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENRVD-GESRLLRALKEGNIEKMELLLS
4K5B Chain:A ((40-100))
------------------VNAKDRFGWTPLHLAAMEGHLEIVEVLLKTGADVNAWADLGTTPLHLAAMKGHLEIVEVLLK
General information:
TITO was launched using:
RESULT:
Template:
4K5B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4131 for 437 contacts (-9.5/contact) +
2D Compatibility (PS) -6909 + (NN) -4832 + (LL) 912
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -19610.0 ( -44.87 by residue)
QMean score : 0.545
(partial model without unconserved sides chains):
PDB file :
Tito_4K5B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4K5B-query.scw
PDB file :
Tito_Scwrl_4K5B.pdb
: